Deep Learning for Drug Response Prediction with Gene Expression Data
  • Ali, Sardar Jaffar
  • Omer, Muhammad
  • Le, Duc Tai
  • Raza, Syed M.
  • Choo, Hyunseung
Citations

SCOPUS

2

초록

Accurately predicting drug responses based on individual patient profiles is a critical challenge in personalized medicine, primarily due to the complex biological variability involved. This paper presents a deep learning framework for predicting changes in gene expression, providing insights into how drugs impact cells at the molecular level. Using data from the Kaggle competition, several models have been evaluated, including LSTM, GRU, Transformer, and Autoencoder architectures. Among these, the 3 -stacked GRU with Attention demonstrated superior performance, achieving the highest sign accuracy of 79% and the lowest mean absolute error across diverse biological conditions. The robust performance of the model highlights the effectiveness of attention mechanisms in capturing critical patterns in gene expression data. © 2025 IEEE.

키워드

Drug response predictionGene expression analysisPersonalized medicine
제목
Deep Learning for Drug Response Prediction with Gene Expression Data
저자
Ali, Sardar JaffarOmer, MuhammadLe, Duc TaiRaza, Syed M.Choo, Hyunseung
DOI
10.1109/ICOIN63865.2025.10992878
발행일
2025
유형
Conference paper
저널명
International Conference on Information Networking
페이지
632 ~ 635