Identification of optimal adenine and cytosine base editors for genome editing in Arabidopsis and soybean
  • Jeong, Yeong Yeop
  • Han, Jun Hee
  • Yu, Jihyeon
  • Bae, Sangsu
  • Seo, Pil Joon
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초록

Base editors, including adenine base editors (ABEs) and cytosine base editors (CBEs), are widely used in numerous organisms to introduce site-specific sequence modifications in genomic DNA without causing double-strand breaks (DSBs). However, these editors exhibit low editing efficiencies, particularly in dicot plants, thereby limiting their application in dicot plant genome engineering. In this study, we assessed the editing efficiencies of various base editors to identify those optimal for base editing in dicot plants. We discovered that ABE8e, an ABE variant, demonstrated superior A-to-G base editing efficiency within A5-A8 windows, and A3A/Y130F-V04, a CBE variant, exhibited the highest C-to-T base editing efficiency within C4-C15 windows in both Arabidopsis and soybean protoplasts. Overall, we recommend these two base editors as prime choices for efficient genome engineering in a range of crop plants. Copyright © 2025 by the Korean Society for Biochemistry and Molecular Biology.

키워드

Adenine base editorsArabidopsisCytosine base editorsGenome editingProtoplastSoybean
제목
Identification of optimal adenine and cytosine base editors for genome editing in Arabidopsis and soybean
저자
Jeong, Yeong YeopHan, Jun HeeYu, JihyeonBae, SangsuSeo, Pil Joon
DOI
10.5483/BMBRep.2024-0102
발행일
2025-10
유형
Article
저널명
BMB Reports
58
7
페이지
288 ~ 292