Tumor microenvironment-based classification for predicting gastric cancer prognosis
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Background: The tumor microenvironment (TME), consisting of tumor-associated stroma and tumor-infiltrating lymphocytes (TIL), is crucial for prognostic information in gastric cancer (GC). Despite its potential, routine clinical adoption remains limited. Methods: In a study of 320 GC patients, virtual staining and image processing were applied to hematoxylin & eosin-stained slides. This method quantified the tumor-stroma ratio (TSR) and TIL, leading to a TME-based prediction model (TMEPATH) using a scoring system derived from univariate Cox regression. Subgroups were categorized to predict GC patient survival, with genomic analysis linking TME-based prognostic models to specific genetic alterations. Results: TSR was categorized into TSR_low (n = 113) and TSR_high (n = 207) using a 0.76 cut-off, selected to maximize the concordance index for overall survival prediction. Two TIL subtypes were defined based on a 0.03 cut-off. TMEPATH, a composite biomarker integrating the TSR- and TIL-based subtypes, stratified patients into low-risk (91 patients, 28.4 %), medium-risk (167 patients, 52.2 %), and high-risk (62 patients, 19.4 %) groups, correlating with survival outcomes (hazard ratio [HR] 1.281; 95 % CI 0.957–1.714 for medium vs. low-risk, and HR 1.768; 95 % CI 1.242–2.517 for high vs. low-risk; log-rank P = 0.0061). These findings were validated in a separate cohort (n = 186) with significant clinical relevance (HR 1.389; 95 % CI 0.855–2.257 for medium vs. low-risk, and HR 2.435; 95 % CI 1.380–4.298 for high vs. low-risk; log-rank P = 0.0064). TSR, TIL, and TMEPATH were associated with microsatellite instability, tumor mutation burden, and CDH1 mutations. Conclusion: The classification of GC into three TME subtypes using TSR and TIL provides a reliable prognostic tool for survival prediction.

키워드

Deep learningGastric cancerImmunePredictionRiskStroma
제목
Tumor microenvironment-based classification for predicting gastric cancer prognosis
저자
Hong, YiyuChi, Sang AhLee, Hye SeungHwang, InwooKang, So YoungAhn, SoominKim, KyungaAn, Ji YeongChoi, Min GewLee, Jun HoBae, Jae MoonSohn, Tae SungKim, Kyoung-Mee
DOI
10.1016/j.compbiomed.2025.110938
발행일
2025-10
유형
Article
저널명
Computers in Biology and Medicine
197
Part A